checkQC/setup.py at master · Molmed/checkQC · GitHub

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from setuptools import setup, find_packages
from checkQC import __version__

setup(
    name='checkQC',
    version=__version__,
    description="A simple program to parse Illumina NGS data and check it for quality criteria.",
    long_description="A simple program to parse Illumina NGS data and check it for quality criteria.",
    keywords=['bioinformatics', 'ngs', 'quality control'],
    author='Johan Dahlberg, SNP&SEQ Technology Platform, Uppsala University',
    author_email='johan.dahlberg@medsci.uu.se',
    url="https://www.github.com/Molmed/checkQC",
    download_url='https://github.com/Molmed/checkQC/archive/{}.tar.gz'.format(__version__),
    python_requires='>3.10',
    install_requires=[
        "click~=8.1.1",
        "PyYAML~=6.0",
        "interop~=1.4.0",
       " xmltodict~=0.13.0",
        "tornado~=6.3.2",
       " sample_sheet~=0.13.0",
       " pandas~=2.2.2",
        "numpy~=2.2.4",
        "samshee~=0.2.3",
        "jsonschema~=4.23.0",
    ],
    packages=find_packages(exclude=["tests*"]),
    test_suite="tests",
    package_data={
        'checkQC': [
            'default_config/config.yaml',
            'default_config/logger.yaml',
            'default_config/config_schema.json',
        ]
    },
    include_package_data=True,
    license='GPLv3',
    entry_points={
        'console_scripts': ['checkqc = checkQC.app:start',
                            'checkqc-ws = checkQC.web_app:start']
    },
)