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feat: retain checkout directory binds during explicit adoption #927

Job	Run time
linux-process-lifetime	23s
Candidate core (macos-latest)	13m 18s
Candidate core (ubuntu-latest)	7m 33s
Config compiler (macos-latest)	3m 13s
runtime-images	39s
secret-scan	12s
Config compiler (ubuntu-24.04-arm)	3m 24s
Config compiler (ubuntu-latest)	3m 35s
test	18m 23s
Config compiler (macos-15-intel)	10m 30s
docker-e2e	21m 55s
Runtime state models	2m 51s
	1h 25m 56s