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NEWS.md

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dynr 0.1.16-XX

  • 2021-04-12
  • MAJOR BUG FIX with smoothed latent state covariance

dynr 0.1.15-1

  • 2019-10-04
  • Multiple imputation for missing data with dynr.mi() function
  • New demo for multiple imputation called MILinearDiscrete
  • New demo for time-varying parameters called SDETVP
  • New wrapper functions for computing smoothed derivative estimates using penalized B-splines implemented with the fda package
  • New plotting functions, including functions to generate diagnostic plots from smoothed derivative estimates, and plot phase portraits
  • New demo for computing and visualizing smoothed derivative estimates in GetDerivs
  • New functionality in dynr.cook() to estimate continuous-time dynamic models with mixed effects through use of theta.formula
  • MAJOR BUG FIXES with missing data

dynr 0.1.14-9

  • 2019-04-01
  • Outlier detection with dynr.taste() function
  • Oulier removal and re-fitting with dynr.tast2() function
  • New demo for outliers called OutlierDetection
  • We now allow 1-regime recipe parts to co-exist with n-regime parts
  • Lots of error checking was added around matching the number of regimes
  • Many cases of the doDykstra error are now safely caught
  • Generally cleaned up the error handling on models that failed to converge
  • Shorten several demos to run faster

dynr 0.1.13-4

  • 2018-09-21
  • You don't need to install R on Windows to C:/R anymore! The default (C:/Program Files/R) now works.
  • New demo for time-varying parameter (TVP) models
  • Several new vignettes covering a range of topics
  • The deviation form of regimes now displays properly in plotFormula
  • No longer require 'outfile' specification in dynr.model()
  • Fix a pointer addressing issue that could have caused crashes

dynr 0.1.12-5

  • 2018-02-08
  • New 'verbose' argument to dynr.cook turns off printing of optimization history
  • New demo for Process Factor Analysis (PFA)
  • Regime-switching printing in plotFormula() with new 'printRS' argument
  • Greatly improved convergence rates for all models
  • Allow full initial covariance estimation
  • Fixed major bug in regime-switching matrix dynamics that formerly crashed R

dynr 0.1.11-8

  • 2017-08-21
  • Noise printing by plotFormula() function
  • Fixed innovation vector computation for larger than 1-dimensional observations

dynr 0.1.11-2

  • 2017-06-16
  • New demo for a linear oscillator with time-varying parameters
  • Fixed printex output for covariates and deviation form of the initial conditions
  • Fixed memory leak for intercepts in measurement models

dynr 0.1.10

  • 2017-05-19
  • Use of individual-level covariates in the initial conditions. See ?prep.initial for details.
  • Deviation form of regime-switching models. Seee ?prep.regimes for details.
  • Access to the predicted, filtered, and smoothed latent variable estimates, and other by-products from the regime-switching extended Kalman filter in the 'cooked' model.
  • We now allow calculation of the negative log-likelihood value, the hessian matrix, and the predicted, filtered, and smoothed latent variable estimates at fixed parameter values without parameter optimization.
  • Beta version of a multiple imputation procedure. See ?dynr.mi for details.
  • Fixed a rounding bug that improves free parameter optimization, especially for models with many observed variables.
  • Improved documentation throughout
  • Added more examples in the help pages

dynr 0.1.9

  • 2017-02-21
  • A new demo example is added to replicate the results from Yang & Chow (2010) paper.
  • Some standard S3 methods are added for the dynrCook class object.
  • autoplot() is added as an alias for dynr.ggplot().
  • dynr.data() now automatically handles ts class objects and equally spaced data with missingness.
  • Changes are made to accommodate the new release of ggplot2.

dynr 0.1.8

  • 2016-08-12
  • In single-regime models, free parameters for intercepts and covariate effects in the measurement model can now be properly estimated.
  • Standard errors are more frequently returned
  • Flags indicate problematic standard errors.
  • Warning messages are more helpful regarding standard errors.
  • A weight flag allows easier convergence of multi-subject models.
  • Several new plotting features.

dynr 0.1.7

  • 2016-06-07
  • Initial release to CRAN!