diff --git a/changelog/seqera-enterprise/v26.1.5.md b/changelog/seqera-enterprise/v26.1.5.md new file mode 100644 index 000000000..64615b4b1 --- /dev/null +++ b/changelog/seqera-enterprise/v26.1.5.md @@ -0,0 +1,24 @@ +--- +title: Seqera Enterprise v26.1.5 +date: 2026-08-18 +tags: [seqera enterprise] +--- + +## Feature updates and improvements + +### Pipelines + +- Updated the bundled Nextflow version to 25.10.6. + +## Bug fixes + +### Data Explorer + +- Fixed the IGV genome viewer failing to load reference genomes in Data Explorer by signing reference genome URLs. +- Fixed IGV genome viewer rendering in Data Explorer, which no longer depends on an externally hosted genome registry. +- Fixed IGV previews of Google Cloud Storage files in Data Explorer returning an authorization error, by signing those URLs with V4 signatures. +- Fixed IGV previews in Data Explorer failing at high zoom levels by signing index URLs independently of their data file URLs. + +## Upgrade notes + +No breaking changes. Standard upgrade procedure applies. diff --git a/platform-cloud/docs/functionality_matrix/overview.md b/platform-cloud/docs/functionality_matrix/overview.md index c8ba6721f..a1c6f6c43 100644 --- a/platform-cloud/docs/functionality_matrix/overview.md +++ b/platform-cloud/docs/functionality_matrix/overview.md @@ -2,7 +2,7 @@ title: "Default version compatibility" description: "Version compatibility for Seqera Platform, nf-launcher, Nextflow, Fusion, and the Connect client" date created: "2024-06-20" -last updated: "2026-07-06" +last updated: "2026-08-18" tags: [compatibility, nextflow, nf-launcher] --- @@ -14,43 +14,31 @@ If you do not specify a Nextflow version in your configuration, Seqera Platform | Platform version | nf-launcher version | Nextflow version | Fusion version | Connect client version | | ---------------- | ------------------- | ---------------- | -------------- | ---------------------- | -| 26.1.4 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.3 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.2 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.0 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 25.3.6 | j21-25.10.2 | 25.10.2 | 2.4 | 0.11.0 | -| 25.3.4 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | -| 25.3.1 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | -| 25.3.0 | j21-25.04.8 | 25.04.8 | 2.4 | | -| 25.2.4 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.2 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.2.0 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.5 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.4 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.1 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.6 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.3 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.2 | j17-24.10.0 | 24.10.0 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 24.2.0 | j17-24.10.0 | 24.10.0 | 2.4 | | +| 26.1.5 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.4 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.3 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.2 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.0 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 25.3.6 | j21-25.10.2 | 25.10.2 | 2.4 | 0.11.0 | +| 25.3.4 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | +| 25.3.1 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | +| 25.3.0 | j21-25.04.8 | 25.04.8 | 2.4 | | +| 25.2.4 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.2 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.0 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.1.5 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.4 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.1 | j17-24.10.5 | 24.10.5 | 2.4 | | +| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | +| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | +| 24.2.6 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | +| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | +| 24.2.3 | j17-24.10.4 | 24.10.4 | 2.4 | | +| 24.2.2 | j17-24.10.0 | 24.10.0 | 2.4 | | +| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | +| 24.2.0 | j17-24.10.0 | 24.10.0 | 2.4 | | `nf-launcher` versions prefixed with `j21` use Java 21, and versions prefixed with `j17` use Java 17. diff --git a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/docker/docker-compose.yml b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/docker/docker-compose.yml index 4edc36d3f..926cd9123 100644 --- a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/docker/docker-compose.yml +++ b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/docker/docker-compose.yml @@ -47,7 +47,7 @@ services: - $HOME/.tower/db/redis:/data migrate: - image: cr.seqera.io/enterprise/platform/migrate-db:v26.1.4 + image: cr.seqera.io/enterprise/platform/migrate-db:v26.1.5 platform: linux/amd64 command: -c "/migrate-db.sh" networks: @@ -64,7 +64,7 @@ services: condition: service_healthy cron: - image: cr.seqera.io/enterprise/platform/backend:v26.1.4 + image: cr.seqera.io/enterprise/platform/backend:v26.1.5 platform: linux/amd64 command: -c '/tower.sh' networks: @@ -85,7 +85,7 @@ services: backend: - image: cr.seqera.io/enterprise/platform/backend:v26.1.4 + image: cr.seqera.io/enterprise/platform/backend:v26.1.5 platform: linux/amd64 command: -c '/wait-for-it.sh db:3306 -t 60; /tower.sh' networks: @@ -110,7 +110,7 @@ services: - cron frontend: - image: cr.seqera.io/enterprise/platform/frontend:v26.1.4 + image: cr.seqera.io/enterprise/platform/frontend:v26.1.5 platform: linux/amd64 networks: - frontend diff --git a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-cron.yml b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-cron.yml index ad9158108..1a5e7031e 100644 --- a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-cron.yml +++ b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-cron.yml @@ -21,7 +21,7 @@ spec: name: tower-yml initContainers: - name: migrate-db - image: cr.seqera.io/enterprise/platform/migrate-db:v26.1.4 + image: cr.seqera.io/enterprise/platform/migrate-db:v26.1.5 command: ["sh", "-c", "/migrate-db.sh"] envFrom: - configMapRef: @@ -32,7 +32,7 @@ spec: subPath: tower.yml containers: - name: backend - image: cr.seqera.io/enterprise/platform/backend:v26.1.4 + image: cr.seqera.io/enterprise/platform/backend:v26.1.5 envFrom: - configMapRef: name: tower-backend-cfg diff --git a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-svc.yml b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-svc.yml index b60b47365..4cf9a22f4 100644 --- a/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-svc.yml +++ b/platform-enterprise_versioned_docs/version-26.1/enterprise/_templates/k8s/tower-svc.yml @@ -29,7 +29,7 @@ spec: # secretName: platform-oidc-certs containers: - name: backend - image: cr.seqera.io/enterprise/platform/backend:v26.1.4 + image: cr.seqera.io/enterprise/platform/backend:v26.1.5 envFrom: - configMapRef: name: tower-backend-cfg @@ -91,7 +91,7 @@ spec: - name: "cr.seqera.io" containers: - name: frontend - image: cr.seqera.io/enterprise/platform/frontend:v26.1.4 + image: cr.seqera.io/enterprise/platform/frontend:v26.1.5 ports: - containerPort: 80 restartPolicy: Always diff --git a/platform-enterprise_versioned_docs/version-26.1/enterprise/configuration/mirroring.md b/platform-enterprise_versioned_docs/version-26.1/enterprise/configuration/mirroring.md index 5a7a5e72b..757662903 100644 --- a/platform-enterprise_versioned_docs/version-26.1/enterprise/configuration/mirroring.md +++ b/platform-enterprise_versioned_docs/version-26.1/enterprise/configuration/mirroring.md @@ -30,9 +30,9 @@ Create a YAML file (`seqera-images.yaml`) to specify which images to sync: ```yaml cr.seqera.io: images-by-semver: - enterprise/platform/backend: ">= v26.1.4" - enterprise/platform/frontend: ">= v26.1.4" - enterprise/platform/migrate-db: ">= v26.1.4" + enterprise/platform/backend: ">= v26.1.5" + enterprise/platform/frontend: ">= v26.1.5" + enterprise/platform/migrate-db: ">= v26.1.5" ``` Run the sync: diff --git a/platform-enterprise_versioned_docs/version-26.1/enterprise/platform-kubernetes.md b/platform-enterprise_versioned_docs/version-26.1/enterprise/platform-kubernetes.md index 3f2ec6a20..0d8a2cbe1 100644 --- a/platform-enterprise_versioned_docs/version-26.1/enterprise/platform-kubernetes.md +++ b/platform-enterprise_versioned_docs/version-26.1/enterprise/platform-kubernetes.md @@ -145,7 +145,7 @@ spec: ... containers: - name: frontend - image: cr.seqera.io/enterprise/platform/frontend:v26.1.4-unprivileged + image: cr.seqera.io/enterprise/platform/frontend:v26.1.5-unprivileged env: - name: NGINX_LISTEN_PORT # If not defined, defaults to 8000. value: 8000 diff --git a/platform-enterprise_versioned_docs/version-26.1/functionality_matrix/overview.md b/platform-enterprise_versioned_docs/version-26.1/functionality_matrix/overview.md index c8ba6721f..a1c6f6c43 100644 --- a/platform-enterprise_versioned_docs/version-26.1/functionality_matrix/overview.md +++ b/platform-enterprise_versioned_docs/version-26.1/functionality_matrix/overview.md @@ -2,7 +2,7 @@ title: "Default version compatibility" description: "Version compatibility for Seqera Platform, nf-launcher, Nextflow, Fusion, and the Connect client" date created: "2024-06-20" -last updated: "2026-07-06" +last updated: "2026-08-18" tags: [compatibility, nextflow, nf-launcher] --- @@ -14,43 +14,31 @@ If you do not specify a Nextflow version in your configuration, Seqera Platform | Platform version | nf-launcher version | Nextflow version | Fusion version | Connect client version | | ---------------- | ------------------- | ---------------- | -------------- | ---------------------- | -| 26.1.4 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.3 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.2 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 26.1.0 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | -| 25.3.6 | j21-25.10.2 | 25.10.2 | 2.4 | 0.11.0 | -| 25.3.4 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | -| 25.3.1 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | -| 25.3.0 | j21-25.04.8 | 25.04.8 | 2.4 | | -| 25.2.4 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.2 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.2.0 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.5 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.4 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | -| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | -| 25.1.1 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.6 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | -| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.3 | j17-24.10.4 | 24.10.4 | 2.4 | | -| 24.2.2 | j17-24.10.0 | 24.10.0 | 2.4 | | -| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | -| 24.2.0 | j17-24.10.0 | 24.10.0 | 2.4 | | +| 26.1.5 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.4 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.3 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.2 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 26.1.0 | j21-26.04 | 26.04 | 2.4 | 0.12.0 | +| 25.3.6 | j21-25.10.2 | 25.10.2 | 2.4 | 0.11.0 | +| 25.3.4 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | +| 25.3.1 | j21-25.10.2 | 25.10.2 | 2.4 | 0.9.0 | +| 25.3.0 | j21-25.04.8 | 25.04.8 | 2.4 | | +| 25.2.4 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.3 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.2 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.1 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.2.0 | j21-25.04.3 | 25.04.3 | 2.4 | | +| 25.1.5 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.4 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.3 | j17-24.10.9-b1 | 24.10.9 | 2.4 | | +| 25.1.1 | j17-24.10.5 | 24.10.5 | 2.4 | | +| 25.1.0 | j17-24.10.5 | 24.10.5 | 2.4 | | +| 24.2.7 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | +| 24.2.6 | j17-24.10.9-a1 | 24.10.9 | 2.4 | | +| 24.2.4 | j17-24.10.4 | 24.10.4 | 2.4 | | +| 24.2.3 | j17-24.10.4 | 24.10.4 | 2.4 | | +| 24.2.2 | j17-24.10.0 | 24.10.0 | 2.4 | | +| 24.2.1 | j17-24.10.2 | 24.10.2 | 2.4 | | +| 24.2.0 | j17-24.10.0 | 24.10.0 | 2.4 | | `nf-launcher` versions prefixed with `j21` use Java 21, and versions prefixed with `j17` use Java 17.