diff --git a/src/Utils/PatchParser.php b/src/Utils/PatchParser.php
index e54a1c3..18d6ecf 100644
--- a/src/Utils/PatchParser.php
+++ b/src/Utils/PatchParser.php
@@ -3,6 +3,7 @@
 namespace ShipMonk\CoverageGuard\Utils;
 
 use Composer\InstalledVersions;
+use LogicException;
 use SebastianBergmann\Diff\Line;
 use SebastianBergmann\Diff\Parser as DiffParser;
 use ShipMonk\CoverageGuard\Config;
@@ -12,6 +13,7 @@
 use function file_exists;
 use function file_get_contents;
 use function is_file;
+use function preg_replace;
 use function str_ends_with;
 use function str_starts_with;
 use function substr;
@@ -63,6 +65,13 @@ public function getPatchChangedLines(
             throw new ErrorException("Failed to read patch file: {$patchFile}");
         }
 
+        // sebastian/diff parses "\ No newline at end of file" as an unchanged line, which shifts numbers of the following lines
+        $patchContent = preg_replace('~^\\\\.*\R?~m', '', $patchContent);
+
+        if ($patchContent === null) {
+            throw new LogicException('Failed to remove no-newline markers from patch file');
+        }
+
         $diffs = (new DiffParser())->parse($patchContent);
         $changes = [];
 
diff --git a/tests/Utils/PatchParserTest.php b/tests/Utils/PatchParserTest.php
new file mode 100644
index 0000000..9e997a4
--- /dev/null
+++ b/tests/Utils/PatchParserTest.php
@@ -0,0 +1,31 @@
+<?php declare(strict_types = 1);
+
+namespace ShipMonk\CoverageGuard\Utils;
+
+use PHPUnit\Framework\TestCase;
+use ShipMonk\CoverageGuard\Config;
+use ShipMonk\CoverageGuard\Printer;
+use ShipMonk\CoverageGuard\StreamTestTrait;
+use function range;
+use function realpath;
+
+final class PatchParserTest extends TestCase
+{
+
+    use StreamTestTrait;
+
+    public function testIgnoresNoNewlineAtEndOfFileMarker(): void
+    {
+        $config = new Config();
+        $config->setGitRoot(__DIR__ . '/../../');
+
+        $patchParser = new PatchParser(__DIR__, new Printer($this->createStream(), noColor: true));
+        $changes = $patchParser->getPatchChangedLines(__DIR__ . '/../_fixtures/PatchParser/no-newline-at-eof.patch', $config);
+
+        $changedFile = realpath(__DIR__ . '/../_fixtures/PatchParser/NoNewlineAtEof.php');
+        self::assertNotFalse($changedFile);
+
+        self::assertSame([$changedFile => range(11, 16)], $changes);
+    }
+
+}
diff --git a/tests/_fixtures/PatchParser/NoNewlineAtEof.php b/tests/_fixtures/PatchParser/NoNewlineAtEof.php
new file mode 100644
index 0000000..f5afafd
--- /dev/null
+++ b/tests/_fixtures/PatchParser/NoNewlineAtEof.php
@@ -0,0 +1,16 @@
+<?php declare(strict_types = 1);
+
+class NoNewlineAtEof
+{
+
+    public function first(): int
+    {
+        return 1;
+    }
+
+    public function second(): int
+    {
+        return 2;
+    }
+
+}
diff --git a/tests/_fixtures/PatchParser/no-newline-at-eof.patch b/tests/_fixtures/PatchParser/no-newline-at-eof.patch
new file mode 100644
index 0000000..5149638
--- /dev/null
+++ b/tests/_fixtures/PatchParser/no-newline-at-eof.patch
@@ -0,0 +1,16 @@
+diff --git a/tests/_fixtures/PatchParser/NoNewlineAtEof.php b/tests/_fixtures/PatchParser/NoNewlineAtEof.php
+index 88952c9..f5afafd 100644
+--- a/tests/_fixtures/PatchParser/NoNewlineAtEof.php
++++ b/tests/_fixtures/PatchParser/NoNewlineAtEof.php
+@@ -8,4 +8,9 @@ class NoNewlineAtEof
+         return 1;
+     }
+
+-}
+\ No newline at end of file
++    public function second(): int
++    {
++        return 2;
++    }
++
++}