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@AI-sandbox

AI-sandbox

Following Ariadne's thread through the genome using AI and ML

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  1. gnomix gnomix Public

    A fast, scalable, and accurate local ancestry method.

    Python 124 19

  2. snputils snputils Public

    Python toolkit for fast genotype I/O, ancestry analysis, population-genetics statistics, genotype QC, GWAS, and visualization

    Python 53 4

  3. iLTM iLTM Public

    iLTM: Integrated Large Tabular Model

    Python 27

  4. ADAMIXTURE ADAMIXTURE Public

    Fast population genetics clustering.

    Python 36 2

  5. Combine Combine Public

    Python 4

  6. pclai pclai Public

    Point Cloud Local Ancestry Inference (PCLAI)

    Python 24 1

Repositories

Showing 10 of 32 repositories
  • iLTM Public

    iLTM: Integrated Large Tabular Model

    AI-sandbox/iLTM's past year of commit activity
    Python 27 Apache-2.0 0 0 0 Updated Sep 13, 2026
  • snputils Public

    Python toolkit for fast genotype I/O, ancestry analysis, population-genetics statistics, genotype QC, GWAS, and visualization

    AI-sandbox/snputils's past year of commit activity
    Python 53 BSD-3-Clause 4 0 0 Updated Sep 10, 2026
  • ARGformer Public
    AI-sandbox/ARGformer's past year of commit activity
    Python 13 Apache-2.0 1 0 0 Updated Sep 7, 2026
  • gnomix Public

    A fast, scalable, and accurate local ancestry method.

    AI-sandbox/gnomix's past year of commit activity
    Python 124 19 26 2 Updated Sep 3, 2026
  • ADAMIXTURE Public

    Fast population genetics clustering.

    AI-sandbox/ADAMIXTURE's past year of commit activity
    Python 36 BSD-3-Clause 2 0 0 Updated Sep 1, 2026
  • argmix Public
    AI-sandbox/argmix's past year of commit activity
    Python 2 MIT 0 0 0 Updated Aug 11, 2026
  • aegen Public

    Autoencoders for genomic data compression, classification, imputation, phasing and simulation.

    AI-sandbox/aegen's past year of commit activity
    Python 9 2 0 0 Updated Jul 30, 2026
  • pclai Public

    Point Cloud Local Ancestry Inference (PCLAI)

    AI-sandbox/pclai's past year of commit activity
    Python 24 1 1 0 Updated Jul 23, 2026
  • Combine Public
    AI-sandbox/Combine's past year of commit activity
    Python 4 MIT 0 0 0 Updated Jul 23, 2026
  • genomen Public
    AI-sandbox/genomen's past year of commit activity
    Python 4 Apache-2.0 0 0 0 Updated Jul 17, 2026

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