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adios2 2.12.0 #277946

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13 changes: 4 additions & 9 deletions Formula/a/adios2.rb
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Original file line number Diff line number Diff line change
@@ -1,10 +1,9 @@
class Adios2 < Formula
desc "Next generation of ADIOS developed in the Exascale Computing Program"
homepage "https://adios2.readthedocs.io"
url "https://github.com/ornladios/ADIOS2/archive/refs/tags/v2.11.0.tar.gz"
sha256 "0a2bd745e3f39745f07587e4a5f92d72f12fa0e2be305e7957bdceda03735dbf"
url "https://github.com/ornladios/ADIOS2/archive/refs/tags/v2.12.0.tar.gz"
sha256 "c59aeb75f3ea9949c4ae2d597115536ee593dedb50592784917ba8d29c8a3b34"
license "Apache-2.0"
revision 3
head "https://github.com/ornladios/ADIOS2.git", branch: "master"

livecheck do
Expand All @@ -31,6 +30,7 @@
depends_on "libpng"
depends_on "libsodium"
depends_on "mpi4py"
depends_on "nanobind"

@cho-m cho-m Apr 17, 2026

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nanobind is usually a replacement for pybind11 so will want to check if pybind11 is still used and if actually runtime or build-only

depends_on "numpy"
depends_on "open-mpi"
depends_on "openssl@3"
Expand All @@ -57,17 +57,11 @@
# Apple clang version 14.0.0 (clang-1400.0.29.202)
fails_with :clang if DevelopmentTools.clang_build_version == 1400

# Upstream PR: https://github.com/ornladios/ADIOS2/pull/4791
patch do
url "https://github.com/ornladios/ADIOS2/commit/1dcffdf15a90282549ce679e96ac59f35e93acde.patch?full_index=1"
sha256 "1133316f038abed99824d00584b70454122083cf0e2717a1322511b91a14c4dd"
end

def python3
"python3.14"
end

def install

Check failure on line 64 in Formula/a/adios2.rb

View workflow job for this annotation

GitHub Actions / Linux arm64

`brew install --verbose --formula --build-bottle adios2` failed on Linux arm64! 

[ 71%] Building CXX object source/utils/CMakeFiles/adios_reorganize.dir/Utils.cpp.o
cd /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source/utils && /home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/g++-12 -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/source -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source -O3 -DNDEBUG -std=gnu++17 -MD -MT source/utils/CMakeFiles/adios_reorganize.dir/Utils.cpp.o -MF CMakeFiles/adios_reorganize.dir/Utils.cpp.o.d -o CMakeFiles/adios_reorganize.dir/Utils.cpp.o -c /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/source/utils/Utils.cpp
[ 71%] Linking CXX executable ../../../../bin/adios2_remote_server
cd /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source/adios2/toolkit/remote && /home/linuxbrew/.linuxbrew/opt/cmake/bin/cmake -E cmake_link_script CMakeFiles/adios2_remote_server.dir/link.txt --verbose=1
/home/linuxbrew/.linuxbrew/Cellar/binutils/2.46.0/bin/ld: /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/lib/libadios2_dill.so.2.12: undefined reference to `sys_icache_invalidate'
collect2: error: ld returned 1 exit status
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/g++-12 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/adios2_remote_server.dir/link.d CMakeFiles/adios2_remote_server.dir/remote_server.cpp.o -o ../../../../bin/adios2_remote_server  -Wl,-rpath,/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/lib: ../../../../lib/libadios2_core.so.2.12.0 ../../../../lib/libadios2_evpath.so.2.12.0 ../../../../lib/libadios2_ffs.so.2.12.0 ../../../../lib/libadios2_atl.so.2.12.0 -ldl /home/linuxbrew/.linuxbrew/lib/libpugixml.so.1.15 -Wl,-rpath-link,/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/lib
make[2]: *** [source/adios2/toolkit/remote/CMakeFiles/adios2_remote_server.dir/build.make:109: bin/adios2_remote_server] Error 1
make[2]: Leaving directory '/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build'
make[1]: *** [CMakeFiles/Makefile2:1387: source/adios2/toolkit/remote/CMakeFiles/adios2_remote_server.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 71%] Building CXX object source/adios2/CMakeFiles/adios2_core_mpi.dir/engine/ssc/SscWriter.cpp.o
cd /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source/adios2 && /home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/g++-12 -DADIOS2_USE_MPI -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX -Dadios2_core_mpi_EXPORTS -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/source -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/thirdparty/perfstubs/perfstubs -I/var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/thirdparty/perfstubs/perfstubs -isystem /home/linuxbrew/.linuxbrew/Cellar/open-mpi/5.0.9/include -isystem /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/thirdparty/perfstubs -O3 -DNDEBUG -std=gnu++17 -fPIC -MD -MT source/adios2/CMakeFiles/adios2_core_mpi.dir/engine/ssc/SscWriter.cpp.o -MF CMakeFiles/adios2_core_mpi.dir/engine/ssc/SscWriter.cpp.o.d -o CMakeFiles/adios2_core_mpi.dir/engine/ssc/SscWriter.cpp.o -c /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/source/adios2/engine/ssc/SscWriter.cpp
[ 71%] Linking CXX executable ../../bin/adios2_reorganize
cd /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/source/utils && /home/linuxbrew/.linuxbrew/opt/cmake/bin/cmake -E cmake_link_script CMakeFiles/adios_reorganize.dir/link.txt --verbose=1
/home/linuxbrew/.linuxbrew/Cellar/binutils/2.46.0/bin/ld: /var/tmp/adios2-20260417-7719-do077z/ADIOS2-2.12.0/build/lib/libadios2_dill.so.2.12: undefined reference to `sys_icache_invalidate'
collect2: error: ld returned 1 exit status
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/g++-12 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/adios_reorganize.dir/link.d CMakeFiles/adios_reorganize.dir/adios_reorganize/main.cpp.o CMakeFiles/adios_reorganize.dir/adios_reorganize/Reorganize.cpp.o CMakeFiles/adios_reorgani
# CMake FortranCInterface_VERIFY fails with LTO on Linux due to different GCC and GFortran versions
ENV.append "FFLAGS", "-fno-lto" if OS.linux?

Expand Down Expand Up @@ -101,6 +95,7 @@
-DADIOS2_BUILD_TESTING=OFF
-DADIOS2_BUILD_EXAMPLES=OFF
-DADIOS2_USE_EXTERNAL_DEPENDENCIES=ON
-DADIOS2_USE_EXTERNAL_PERFSTUBS=OFF
]

system "cmake", "-S", ".", "-B", "build", *args, *std_cmake_args
Expand Down
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