Feature/dragen genome untar - #22

Merged

Jorisvansteenbrugge merged 25 commits into

mainfrom

feature/dragen_genome_untar

Aug 31, 2026

Commits on Aug 26, 2026

Add dragen and dragenutils
rernst
authored
6d90c3f
Fix typo
rernst
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13ea4da
Move dragen to dragen wgs
rernst
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ed573e3
Fix dragen tests
rernst
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3d2f193
Update to smaller container
rernst
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47e6064
Remove wgs specific args
rernst
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5aed942
Use prefix
rernst
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d6b6b97
Add prefix to test
rernst
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9653af8
Switch quotes
rernst
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dd19f8e
Remove todo
rernst
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e17708c
Fix version one more time...
rernst
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134f915
Remove set -ex
rernst
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e0a8d3e
Fix version
rernst
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e24cc82
Update snap
rernst
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9d24eba
Bump dragen utils containers to 1.0.0
rernst
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ff6695d
Add BAM and BAI output files to dragen
Jorisvansteenbrugge
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162aa61
include bai in snapshot
Jorisvansteenbrugge
authored
e70ebc7

Commits on Aug 28, 2026

genome tar processing flow
Jorisvansteenbrugge
committed
b31f4e2
run dragen with preprocessed genome tar
Jorisvansteenbrugge
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04800c4
remove job array param ref
Jorisvansteenbrugge
committed
5d8f653
fix linting
Jorisvansteenbrugge
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d725faa
Merge branch 'main' into feature/dragen_genome_untar
Jorisvansteenbrugge
authored
444c50a
Feature/dragen bam (#23)
Jorisvansteenbrugge
authored
dbade24

Commits on Aug 31, 2026

rename untar_genome to ica_untar_genome_bundle
Jorisvansteenbrugge
committed
9ab25ff
fix linting
Jorisvansteenbrugge
committed
e367d17