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Add mzIdentML 1.3 export module #9

Description

@ypriverol

Summary

Add MZIDENTML_EXPORT module that converts FDR-filtered results to mzIdentML 1.3. xiSEARCH path uses xi-mzidentml-converter. Scout path uses native mzIdentML export or custom converter. Required for PRIDE deposition.

Tasks

  • Create MZIDENTML_EXPORT module (modules/local/mzidentml_export/)
  • Add xi-mzidentml-converter to container
  • Create bin/scout_to_mzidentml.py (placeholder or Scout native)
  • Publish both CSV and mzIdentML outputs

Activity

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