Issues

• Some files missing in mitochondria pipeline

  broadinstitute/warp#1952 · Filter by author yslee-genome4me opened on Sep 4, 2026
  2

• перестал работать WARP

  broadinstitute/warp#1927 · Filter by author dimasik2011-max opened on Aug 15, 2026

• oracle

  broadinstitute/warp#1901 · Filter by author princess38827 opened on Jul 29, 2026

• No reads passing filters for dragmap-aligned bams follow-up

  broadinstitute/warp#1882 · Filter by author xyy1093 opened on Jul 6, 2026

• Add optional Picard CreateExtendedIlluminaManifest task to IlluminaGenotypingArray

  broadinstitute/warp#1876 · Filter by author sdslack opened on Jun 30, 2026

• JointGenotyping_v1.7.2 vqsr_snp_filter_level and vqsr_indel_filter_level are incorrectly shown as optional

  broadinstitute/warp#1870 · Filter by author jedpe opened on Jun 24, 2026

• Summary Documentation

  broadinstitute/warp#1790 · Filter by author anaellle opened on Feb 27, 2026

• WARP Workflow "out of memory" issue on Terra

  broadinstitute/warp#1677 · Filter by author yxhan opened on Sep 23, 2025
  2

• parsing error in WGS single sample workflow

  broadinstitute/warp#1538 · Filter by author mmwheel opened on Mar 6, 2025
  4

• Using samtools sort instead of Picard WGS

  broadinstitute/warp#1119 · Filter by author ekiernan opened on Nov 8, 2023
  1

• Can't calculate duplicates from flag in BAM output of Optimus, Multiome, and Slideseq

  broadinstitute/warp#1115 · Filter by author ekiernan opened on Nov 2, 2023
  2

• BamProcessing.wdl, Float contamination = read_float(stdout())

  broadinstitute/warp#1059 · Filter by author ad2n15 opened on Aug 7, 2023
  1

• Specify Xmx and Xms values according to Cromwell's ${MEM_SIZE} and ${MEM_UNIT} variables

  ticket made
  broadinstitute/warp#481 · Filter by author michaelgatzen opened on Oct 27, 2021
  3