Ensemble modeling is used to build accurate predictive models to answer a specific question by synthesizing the results of multiple models into a single score. This is a tiny python environment for ensemble modeling of the metabolic systems.
The python script requires modules including *python 3 *numpy *scipy *parallel python (pp) The main is a example and tutrial of this environment.
This file a example metabolic model of Synechocystis sp. PCC 6803 (PCC 6803) under the photoautotrophic condition. This file consists of Reactions, Metabolites, and Parameters parts.
*ID *Stoichiometry *type of rate equation *effector *Initial metabolic flux
- ID
- Initial metabolite concentration
- type of metabolite "initial" metabolite is constant
- Reaction ID
- Parameter
- Lower boundary
- Reference level (not used)
- Upper boundary
- type of distribution