improved epistasis cat response - #15

Merged

harmsm merged 27 commits into

harmslab:mainfrom

Jul 23, 2026

Commits on Jul 12, 2026

bump to version 0.4.2
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21c8ec1
Merge branch 'main' of github.com:harmslab/tfscreen
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80f1c8b

Commits on Jul 13, 2026

fixed numerical stability in build empirical matrix
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b401b58

Commits on Jul 16, 2026

broke out genotype-level fitting into its own script
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0566949
updated batch sizing to avoid occasional OOM
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b59f66c

Commits on Jul 17, 2026

added genotype subsetting on growth prediction
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10c107e
better OOM handling in predict growth
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335b835

Commits on Jul 18, 2026

Commits on Jul 19, 2026

added interpretative layer to cat-response
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53312da
more sophisticated cat response code
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b75b618

Commits on Jul 20, 2026

improved cat_response stability and fitting
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790ccce
added toy thermo for intuition building
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30f3a81
added logit scale to epistasis
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18eedd0
updated cat response
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a104747
updated cat_response caller
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77ccd9a
updating cat_response caller
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54ea3d0
improving cat response
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cc4442a
updating cat response
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5721bd8
updating cat response
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584b43c
updating/locking down cat response
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9b1b02e

Commits on Jul 21, 2026

added toy model version to investigate observables
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cbdde60
joint epistasis estimator, generic compare posterior
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82c8fa6

Commits on Jul 22, 2026

added docs/manuscript/
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873847c
version bump to 0.4.3
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56bd5ca