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1 change: 1 addition & 0 deletions resources/tools/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -61,6 +61,7 @@ Check out the [readers and writers below](#zarr-readers--writers) to interact wi
| BioIO Conversion | [<img src="https://www.google.com/s2/favicons?sz=256&domain_url=https%3A%2F%2Fwww.allencell.org" alt="BioIO logo" width="30" height="30">](https://github.com/bioio-devs/bioio-conversion) | CLI & scripting tool for easily converting images to OME-Zarr. Requires [bioio-ome-zarr](https://github.com/bioio-devs/bioio-ome-zarr) |
| EuBI-Bridge | [![image](https://github.githubassets.com/favicons/favicon.svg)](https://github.com/Euro-BioImaging/EuBI-Bridge) | A tool for distributed conversion of microscopic image collections into the OME-Zarr format. |
| ITKIOOMEZarrNGFF | [![image](https://github.githubassets.com/favicons/favicon.svg)](https://github.com/InsightSoftwareConsortium/ITKIOOMEZarrNGFF) | An ITK external module for IO of images stored in OME-Zarr file format. | Reading & Writing |
| kfb2zarr | [![image](https://github.githubassets.com/favicons/favicon.svg)](https://github.com/camlloyd/kfb2zarr) | Convert KFBio whole slide images (.kfb, .kfbf) to OME-Zarr. |
| multiscale-spatial-image | [![image](https://github.githubassets.com/favicons/favicon.svg)](https://github.com/spatial-image/multiscale-spatial-image) | Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-Zarr. | Reading & Writing |
| nd2 | [![image](https://github.githubassets.com/favicons/favicon.svg)](https://github.com/tlambert03/nd2) | A Python library for reading nd2 files with native export to OME-Zarr, supporting multi-well plates and complete metadata preservation. |
| Nextflow (nf-omezarr) | [<img src="https://www.google.com/s2/favicons?sz=256&domain_url=https://www.nextflow.io/g" alt="Nextflow logo" width="30" height="30">](https://github.com/JaneliaSciComp/nf-omezarr) | A Nextflow pipeline for converting directories of images to OME-Zarr using bioformats2raw |
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