Issues

• Unresponsive when exporting a movie as PNG images

  schrodinger/pymol-open-source#519 · Filter by author jrom99 opened on Sep 18, 2026

• Heap buffer overflow in PConvPyListToStringVLA with non-ASCII wizard messages

  schrodinger/pymol-open-source#517 · Filter by author AkiraLan opened on Aug 12, 2026

• symexp does weird things when symmetry annotation is missing

  schrodinger/pymol-open-source#509 · Filter by author chmnk opened on May 27, 2026

• PyMOL 3.1.0a0 crashes when reading 3.0.0 session files

  schrodinger/pymol-open-source#508 · Filter by author pjmartel opened on May 18, 2026
  1

• Support list expansion syntax to selection expressions

  schrodinger/pymol-open-source#503 · Filter by author pslacerda1 opened on Mar 26, 2026
  2

• _protonate_fallback improvement with formal_charge

  schrodinger/pymol-open-source#500 · Filter by author speleo3 opened on Mar 12, 2026
  2

• Support for USDZ and GLB/glTF 2.0 Export for Augmented Reality

  enhancement
  schrodinger/pymol-open-source#497 · Filter by author JMB-Scripts opened on Feb 20, 2026
  1

• All atom labels are displayed as rectangles (AMD Mesa[radeonsi] driver)

  driver-issue
  schrodinger/pymol-open-source#496 · Filter by author dryndyk opened on Feb 19, 2026
  16

• __file__ always points to __init__.py

  schrodinger/pymol-open-source#484 · Filter by author TristynAlxander opened on Nov 27, 2025
  2

• Object level properties and selections

  schrodinger/pymol-open-source#479 · Filter by author pslacerda1 opened on Nov 1, 2025
  11

• Volumes Don't Render in command-line only mode

  enhancementrendering-ray
  schrodinger/pymol-open-source#473 · Filter by author kmdalton opened on Oct 10, 2025
  3

• skewed maps from cryosparc

  schrodinger/pymol-open-source#466 · Filter by author yoyoq12 opened on Jul 24, 2025
  1

• Build via setup.py fails at ov_utility.cpp

  schrodinger/pymol-open-source#464 · Filter by author nemoboi opened on Jul 17, 2025
  1

• Cartoon representation disappear in extracted molecules when chain IDs are not set

  schrodinger/pymol-open-source#463 · Filter by author ErikPoppleton opened on Jul 16, 2025
  2

• User defined nucleic acid mutagenesis

  schrodinger/pymol-open-source#456 · Filter by author rimonparves opened on May 14, 2025
  5

• Migrate from GLEW to libepoxy or GLAD

  schrodinger/pymol-open-source#451 · Filter by author cryptomilk opened on Apr 23, 2025

• pymol open source won't start after RedHat updated

  schrodinger/pymol-open-source#450 · Filter by author dvszhang0 opened on Apr 21, 2025

• pymol 3.1.0 broke rendering of ABPS Electrostatics plugin under Wayland on Nvidia non-free drivers

  bug
  schrodinger/pymol-open-source#447 · Filter by author jwhowarth opened on Apr 3, 2025
  15

• Make a movie with camera rotation preceding trajectory

  schrodinger/pymol-open-source#440 · Filter by author HoaSoup opened on Mar 13, 2025
  4

• BUG read_pdbstr cause program to sleep forever

  schrodinger/pymol-open-source#436 · Filter by author shaoqx opened on Feb 22, 2025
  1

• fuse fails when attaching C-terminal NMe residue

  schrodinger/pymol-open-source#430 · Filter by author mtessmer opened on Feb 6, 2025
  1

• How to reliably compile on Linux Mint 22?

  schrodinger/pymol-open-source#424 · Filter by author ghost opened on Jan 24, 2025
  3

• Requirements installation

  schrodinger/pymol-open-source#423 · Filter by author pslacerda opened on Jan 18, 2025
  21

• Error: no prior image available when export image

  schrodinger/pymol-open-source#412 · Filter by author JiahaoWongg opened on Dec 6, 2024
  1

• Setup cannot import cmake

  schrodinger/pymol-open-source#411 · Filter by author loomcode opened on Dec 4, 2024
  2