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seqMismatch functions rename - #139
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…ntation to include count_trailing parameter
ayeletperes
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Sep 28, 2026
Drops src/ and Rcpp; requires alakazam >= 1.5.0, which exports seqMismatchCount (immcantation/alakazam#139).
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Renamed seqMismatch Rccp functions, and added the missing ambiguous character "?"